Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ubiD5UbiD5: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. (518 aa)    
Predicted Functional Partners:
ubiX5
UbiX5: 3-octaprenyl-4-hydroxybenzoate carboxylyase.
 
  
 0.876
ppcY
PpcY: predicted subunit of carboxylase involved in anaerobic phenol degradation; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
  
 0.854
ubiX
UbiX: 3-octaprenyl-4-hydroxybenzoate carboxylyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
  
 0.854
ubiX2
UbiX2: 3-octaprenyl-4-hydroxybenzoate carboxylyase.
 
  
 0.854
ubiX3
UbiX3: 3-octaprenyl-4-hydroxybenzoate carboxylyase.
 
  
 0.854
ubiX4
UbiX4: 3-octaprenyl-4-hydroxybenzoate carboxylyase.
 
  
 0.854
lcfB5
LcfB5: long-chain-fatty-acid--CoA ligase.
       0.565
CCK80924.1
TRAP transporter, solute receptor, TAXI family; Signal peptide.
       0.437
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.