Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK80928.1Putative transposase, ISSpo3. (174 aa)    
Predicted Functional Partners:
CCK80929.1
Transposase, IS3/IS911 family.
       0.554
CCK82285.1
Conserved uncharacterized protein, related to CapB.
  
     0.538
CCK80927.1
Uncharacterized protein; Signal peptide.
       0.497
CCK78441.1
Response regulator protein.
  
 
 0.447
mazF
MazF: transcriptional modulator of MazE/toxin.
  
     0.436
prtE
PrtE: proteases secretion protein E.
  
  
 0.435
CCK79625.1
Two component system sensor histidine kinase, hybrid.
  
 
 0.434
CCK78445.1
TonB-dependent receptor.
  
     0.431
prtD2
PrtD2: proteases secretion ATP-binding protein.
  
     0.422
CCK80930.1
Putative integrase, fragment.
       0.417
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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