Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
adh2Adh2: iron-containing alcohol dehydrogenase. (380 aa)    
Predicted Functional Partners:
adh3
Adh3: iron-containing alcohol dehydrogenase.
  
  
 
0.913
CCK80829.1
Flavin containing amine oxidase.
   
 
 0.903
CCK80969.1
Two component system sensor histidine kinase.
 
    0.846
CCK80970.1
Two component system response regulator, sigma54-specific.
 
     0.805
CCK80967.1
Conserved uncharacterized protein.
       0.693
cobT
CobT: predicted nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 
 0.636
had
Had: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase.
  
 
 0.623
glgA
GlgA: glycogen synthase.
   
    0.558
nifJ
NifJ: pyruvate-flavodoxin oxidoreductase.
  
  
 0.533
hbsD1
HbsD1: hydroxybenzylsuccinate synthase activating enzyme.
  
  
 0.500
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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