STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK81012.1Geranylgeranyl reductase. (365 aa)    
Predicted Functional Partners:
CCK82360.1
Magnesium chelatase.
 
  
 0.773
CCK82359.1
Magnesium chelatase.
 
  
 0.771
etfB1
EtfB1: electron transfer flavoprotein, beta-subunit.
  
 
 0.649
bamO
BamO: electron transfer flavoprotein, beta subunit.
  
 
 0.649
etfB2
EtfB2: electron transfer flavoprotein, beta subunit.
  
 
 0.649
etfB3
EtfB3: electron transfer flavoprotein, beta subunit.
  
 
 0.649
etfB4
EtfB4: electron transfer flavoprotein, beta subunit.
  
 
 0.649
ispH
IspH: predicted 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
  
 0.590
CCK82350.1
Cobaltochelatase.
 
  
 0.569
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 
 0.559
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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