STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK81038.14Fe-4S ferredoxin iron-sulfur binding domain protein. (316 aa)    
Predicted Functional Partners:
mvhD7
MvhD7: methyl-viologen-reducing hydrogenase, delta subunit.
   
 0.966
asrA2
AsrA2: predicted anaerobic sulfite reductase, subunit A.
 
   
 0.901
asrB2
AsrB2: predicted anaerobic sulfite reductase, subunit B.
 
   
 0.901
rnfD
RnfD: electron transport complex protien RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
  
 
 0.877
mvhD5
MvhD5: methyl-viologen-reducing hydrogenase, delta subunit.
   
 0.867
rnfG
RnfG: electron transport complex protein RnfG; Signal peptide.
  
 
 0.837
hdlA8
HdlA8: heterodisulfide reductase-like protein, iron-sulfur subunit.
 
   
 0.826
rnfB
RnfB: predicted electron transport protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.817
rnfE
RnfE: electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
  
 
 0.817
rnfB-2
FAD-dependent oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.817
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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