Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hdlA9HdlA9: heterodisulfide reductase-like protein, iron-sulfur subunit. (1024 aa)    
Predicted Functional Partners:
mvhD8
MvhD8: methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.939
mvhD7
MvhD7: methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.844
bamF1
BamF1:coenzyme F420 non-reducing hydrogenase, delta subunit.
 
 
 0.843
bamF3
BamF3: DNA-binding domain modulated methyl-viologen-reducing hydrogenase, delta subunit.
 
 
 0.843
CCK78433.1
Predicted CoB--CoM heterodisulfide reductase, subunit B.
 
 
 0.814
qmoB
QmoB: predicted quinone interacting membrane bound oxidoreductase, subunit B.
 
 
0.803
mvhD3
MvhD3: methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.797
mvhD2
MvhD2: methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.788
mvhD4
MvhD4: methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.770
mvhD6
MvhD6: methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.760
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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