STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhA2FdhA2: formate dehydrogenase, subunit A. (903 aa)    
Predicted Functional Partners:
rnfB
RnfB: predicted electron transport protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 0.988
CCK81047.1
NADH-quinone oxidoreductase, subunit F, N-terminal Fragment.
 
 
 0.975
CCK78597.1
Putative 4Fe-4S ferredoxin.
  
 0.965
bamH1
BamH1: NADH-quinone oxidoreductase, subunit F.
 
 
 0.957
bamH3
BamH3: NADH-quinone oxidoreductase, subunit F.
 
 
 0.957
CCK78214.1
Predicted 4Fe-4S ferredoxin, predicted function in phenylacetaldehyde oxidation.
 
 
 0.936
CCK78594.1
4Fe-4S ferredoxin.
 
 
 0.936
CCK79930.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; Signal peptide.
  
 
 0.936
fdhB
FdhB: formate dehydrose, subunit B.
  
 
 0.936
hmcB
HmcB: HMC redox complex, transmembrane protein; Signal peptide.
  
 
 0.936
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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