Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CCK81051.1Serine protease, related to trypsin; Signal peptide. (495 aa)    
Predicted Functional Partners:
CCK79243.1
Tetratricopeptide repeat protein.
  
 
 0.722
rpsF
RpsF: 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
 
 0.715
rplK
RplK: 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.693
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 0.686
rplD
RplD: 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
   
 
 0.686
rpsI
RpsI: 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
   0.681
rpsM
RpsM: 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
   0.672
CCK79625.1
Two component system sensor histidine kinase, hybrid.
  
  
 0.660
CCK80058.1
Two component system sensor histidine kinase.
  
  
 0.658
CCK81789.1
Predicted polyketide synthase.
  
 
 0.658
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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