Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK81055.1Uncharacterized protein. (427 aa)    
Predicted Functional Partners:
CCK81053.1
Uncharacterized protein; Signal peptide.
       0.688
CCK81054.1
Conserved uncharacterized protein.
       0.675
CCK79139.1
MCP methyltransferase/methylesterase, CheR/CheB-like with PAS/PAC sensor domain.
  
 
 0.672
ftsK
FtsK: predicted DNA translocase; Signal peptide.
   
 
 0.663
ftsK-2
FtsK: DNA translocase; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.663
CCK78803.1
Putative protease family S8 and S53 protein.
  
 
 0.628
CCK81056.1
Uncharacterized protein; Signal peptide.
       0.581
CCK81052.1
Uncharacterized protein; Signal peptide.
       0.579
CCK81789.1
Predicted polyketide synthase.
  
 
 0.548
prc
Prc: tail-specific protease; Belongs to the peptidase S41A family.
  
 
 0.528
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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