Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK81061.1Fibronectin type III domain protein; Signal peptide. (670 aa)    
Predicted Functional Partners:
CCK81059.1
Conserved uncharacterized protein.
 
     0.852
CCK81060.1
Tetratricopeptide repeat domain protein.
       0.792
CCK81062.1
Uncharacterized protein; Signal peptide.
       0.723
CCK81063.1
Two component system response regulator, OmpR family, related to CopR.
     
 0.582
CCK81064.1
Two component system sensor histidine kinase, related to CopS; Signal peptide.
       0.579
CCK81058.1
Conserved uncharacterized protein; Signal peptide.
       0.576
CCK81057.1
Uncharacterized protein; Signal peptide.
 
     0.555
degP
DegP: serine protease, do-like; Belongs to the peptidase S1C family.
     
 0.451
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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