Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK81098.1Extracellular ligand-binding receptor. (404 aa)    
Predicted Functional Partners:
CCK81097.1
Two component system sensor histidine kinase.
 
   
 0.940
livJ2
LivJ2: ABC-transporter Leu/Ile/Val/Thre/Ala-binding protein; Signal peptide.
  
  
  0.933
livK3
LivK3: leucine-specific-binding protein; Signal peptide.
  
  
  0.930
CCK79635.1
Leu/Ile/Val-binding protein; Signal peptide.
  
  
  0.924
CCK79624.1
ABC-type branched-E47chain amino acid transporter, periplasmic binding protein; Signal peptide.
  
 
  0.921
livJ
LivJ: Leu/Ile/Val-binding protein; Signal peptide.
  
  
 
0.908
CCK81096.1
Two component system response regulator modulated with antisigma-factor antagonist domain.
 
     0.880
CCK81095.1
Redoxin; Signal peptide.
 
 
   0.812
livM2
LivM2: branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.803
CCK81094.1
Rhodanese domain protein.
 
     0.762
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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