Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK81125.1Conserved uncharacterized protein. (182 aa)    
Predicted Functional Partners:
recA
RecA: recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
  
 0.711
recX
RecX: regulatory protein; Modulates RecA activity; Belongs to the RecX family.
  
  
 0.708
CCK81282.1
Conserved uncharacterized protein.
  
     0.671
uvrD2
UvrD2: ATP-dependent DNA helicase.
 
  
 0.645
CCK79472.1
Conserved uncharacterized protein.
  
     0.559
dsrD
DsrD: sulfite reductase, dissimilatory-type, delta subunit; Possibly involved in transcription or translation of sulfite reductase genes.
  
     0.557
metS
MetG: methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
 0.544
CCK82264.1
Conserved uncharacterized protein, UPF0153.
  
    0.544
CCK80708.1
Conserved uncharacterized protein, DUF490.
  
     0.531
polA
PolA: DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.529
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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