STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpRTrpR: predicted repressor protein. (86 aa)    
Predicted Functional Partners:
CCK81171.1
AMMECR1 domain protein.
       0.581
purB
PurB: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.579
ald
Ald: alanine dehydrogenase; Belongs to the AlaDH/PNT family.
       0.523
CCK81789.1
Predicted polyketide synthase.
  
     0.490
gsp
Gsp: 4?-phosphopantetheinyl transferase (gramicidin synthetase-activating enzyme); Belongs to the P-Pant transferase superfamily.
  
     0.456
CCK81177.1
Phosphodiesterase.
 
     0.453
CCK82136.1
Predicted adenosine/AMP deaminase; Signal peptide.
  
     0.451
CCK81174.1
Uncharacterized protein.
       0.445
CCK80270.1
Conserved uncharacterized protein.
  
     0.420
CCK82306.1
Uncharacterized protein.
  
     0.417
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: low (14%) [HD]