Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK81206.1Phage portal protein, lambda family. (512 aa)    
Predicted Functional Partners:
CCK81203.1
Major head protein.
 
   0.980
CCK81205.1
Minor capsid protein C, degenerate.
 
  
 0.949
CCK81204.1
Conserved uncharacterized protein.
 
  
 0.937
CCK81221.1
Phage terminase GpA.
 
  
 0.874
CCK81207.1
Uncharacterized protein.
       0.773
CCK78926.1
Predicted cytochrome c family protein; Signal peptide.
  
   0.731
bssG2
BssG2: conserved uncharacterized protein associated with anaerobic toluene degradation gene cluster.
  
     0.665
CCK81225.1
Phage-plasmid primase, P4 family.
 
  
 0.659
CCK81197.1
Phage tail tape measure protein, TP901 family.
 
     0.563
CCK81224.1
Phage P4 alpha helicase/primase zinc-binding domain protein.
  
     0.544
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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