Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK81287.1Conserved uncharacterized protein. (252 aa)    
Predicted Functional Partners:
pccB
PccB: propionyl-CoA carboxylase, beta subunit.
       0.631
CCK81285.1
Uncharacterized protein; Signal peptide.
       0.606
CCK79898.1
Predicted flavodoxin/nitric oxide synthase.
  
     0.519
CCK78210.1
Flavodoxin family protein.
  
     0.517
pycB
PycB: pyruvate carboxylase, subunit B.
 
     0.490
pepQ
PepQ: Xaa-Pro dipeptidase.
 
     0.478
prkA
PrkA: serine protein kinase.
  
     0.471
CCK81288.1
Putative ThiS family protein.
       0.459
CCK79862.1
Conserved uncharacterized protein.
  
     0.417
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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