Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
CCK81302.1Conserved uncharacterized protein, DUF1343. (391 aa)    
Predicted Functional Partners:
CCK80121.1
Predicted beta-lactamase.
  
 0.986
nagZ
NagZ: beta-N-acetylhexosaminidase.
  
 0.960
cmk-2
CmK: cytidylate kinase.
       0.541
hisC
HisC: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.541
dacC
DacC: predicted peptidase S13, D-Ala-D-Ala carboxypeptidase C.
  
     0.467
CCK80120.1
Peptidase, S66 family, LD-carboxypeptidase A.
  
     0.456
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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