STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnKPhnK: phosphonate transport ATP-binding protein. (263 aa)    
Predicted Functional Partners:
phnI
PhnI: phopsphonate metabolism protein, predicted C-P lyase subunit.
 
 
 0.999
phnJ
PhnJ: phopsphonate metabolism protein, predicted C-P lyase subunit; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 0.999
phnG
PhnG: phopsphonate metabolism protein, predicted C-P lyase subunit.
 
 
 0.998
phnH
PhnH: phopsphonate metabolism protein, predicted C-P lyase subunit.
 
 
 0.997
phnL
PhnL: phosphonate transport ATP-binding protein.
 
0.991
phnM
PhnM: phopsphonate metabolism protein, predicted C-P lyase subunit.
 
  
 0.963
phnD-2
PhnD: phosphonates-binding periplasmic protein; Signal peptide.
 
  
 0.926
CCK79732.1
Peptide ABC transporter, permease protein.
 
     0.916
CCK82188.1
Predicted ABC transporter, ATP-binding protein.
 
    
0.902
CCK82059.1
Predicted oligopeptide/dipeptide ABC transporter, permease protein; Signal anchor.
 
     0.898
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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