STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prpBPrpB: predicted methylisocitrate lyase. (287 aa)    
Predicted Functional Partners:
prpF
PrpF: predicted 3-methylitaconate isomerase.
 
  
 0.955
CCK79135.1
MmgE/PrpD family protein.
 
  
 0.931
gltA
GltA: citrate synthase; Belongs to the citrate synthase family.
 
 0.921
ilvG
IlgV: acetolactate synthase, large subunit.
  
 
 0.880
pyc
Pyc: pyruvate carboxylase.
   
 0.872
gltA2
GltA2: citrate synthase, type II; Belongs to the citrate synthase family.
 
 0.858
ppdK
PpdK: pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
  
 
 0.847
pyk
Pyk: pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.845
CCK82152.1
Pyruvate phosphate dikinase, PEP/pyruvate-binding.
  
 
 0.838
sfcA
SfcA: NAD-dependent malic enzyme.
    
 0.837
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.