Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCK81440.1Predicted iron-dependent repressor, DtxR family. (139 aa)    
Predicted Functional Partners:
fur
Fur: ferric uptake regulator.
  
  
 0.747
CCK79836.1
Conserved uncharacterized protein.
   
   0.723
hyfI
HyfI: predicted hydrogenase 4, component I (small subunit of [NiFe] hydrogenase).
    
   0.690
CCK79209.1
Cation ABC transporter, permease protein.
  
  
 0.627
tpx
Tpx: thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
  
  
 0.601
CCK79210.1
Mn2+/Zn2+ ABC transporter, ATPase component.
  
  
 0.600
CCK79211.1
Periplasmic solute-binding protein; Signal peptide; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.588
CCK81439.1
Predicted heavy metal translocating P-type ATPase.
     
 0.546
CCK80354.1
Predicted signal peptidase I; Belongs to the peptidase S26 family.
   
    0.543
CCK79888.1
NAD-dependent epimerase/dehydratase.
   
    0.534
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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