STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmuVHmuV: hemin transport system, ATP-binding protein. (263 aa)    
Predicted Functional Partners:
hemU
HmuU: hemin transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.979
CCK81451.1
iron(III) ABC transporter, solute-binding protein.
 
 
 0.935
msbA
MsbA: lipid A export ATP-binding/permease protein; Signal peptide.
  
0.911
CCK78635.1
Uncharacterized ABC transporter, ATP-binding and permease domain.
  
0.909
mdlA
MdlA: multidrug resistance ABC transporter, ATP-binding/permease protein.
  
0.909
CCK82491.1
ABC transporter, permease protein; Signal peptide; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.905
CCK79565.1
Predicted type I secretion system ATPase.
 
    
0.902
CCK81332.1
Peptide iron ABC transporter, permease protein; Signal anchor; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.902
CCK81579.1
ABC transporter, permease protein; Signal peptide; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.902
CCK79093.1
Predicted iron ABC transporter, permease protein; Signal peptide; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.897
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.