Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK81504.1Predicted response regulator. (161 aa)    
Predicted Functional Partners:
CCK80996.1
Two component system sensor histidine kinase.
 
 
 
 0.794
CCK78858.1
Two component system sensor histidine kinase, PAS domains.
 
 
 
 0.789
CCK80592.1
Two component system sensor histidine kinase.
 
 
 
 0.788
CCK81772.1
Two component system sensor histidine kinase, PAS + GAF domain.
 
 
 
 0.784
CCK82398.1
Conserved uncharacterized protein.
  
     0.741
CCK81942.1
Xylose isormerase domain protein, TIM barrel.
  
     0.610
CCK78859.1
Putaitve sensor protein.
 
 
 
 0.609
CCK79711.1
Two component system sensor histidine kinase.
 
 
 
 0.599
CCK80553.1
Universal stress protein family protein.
  
     0.585
bamC1
BamC1: 4Fe-4S ferredoxin.
  
     0.568
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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