Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK81544.1Conserved uncharacterized protein; Signal peptide. (389 aa)    
Predicted Functional Partners:
CCK81543.1
Conserved uncharacterized protein.
 
     0.823
CCK80680.1
Conserved uncharacterized protein, UPF0153.
  
     0.681
phaE
PhaE: putative poly(3-hydroxyalkanoate) synthase component.
  
     0.669
CCK82388.1
Predicted metal ion efflux outer membrane protein.
  
     0.615
CCK81342.1
Putative type IV pilus assembly protein, relted to PilZ.
  
     0.569
flgK
FlgK: putative flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
  
     0.551
phaR
PhaR: predicted polyhydroxyalkanoate synthesis repressor; Signal peptide.
  
     0.549
CCK80376.1
Predicted bile acid:sodium symporter family protein; Signal peptide.
  
     0.528
CCK82389.1
Predicted metal ion efflux outer membrane protein; Signal peptide.
  
     0.527
CCK80271.1
Predicted esterase/lipase.
  
     0.507
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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