Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mltDMltD: membrane-bound lytic murein transglycosylase D; Signal peptide. (624 aa)    
Predicted Functional Partners:
flgF
FlgF: flagellar basal-body rod protein.
   
   0.644
rlpA
RlpA: rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
  
 0.625
CCK80121.1
Predicted beta-lactamase.
 
   
 0.561
pabC
PabC: aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
   
 0.551
CCK81655.1
Peptidase U32.
       0.540
ostA
OstA: organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
  
 0.490
amiC
AmiC: N-acetylmuramoyl-L-alanine amidase amiC precursor.
 
  
 0.480
CCK80356.1
Peptidase, M23 family.
 
   
 0.479
mltB
MltB: membrane-bound lytic murein transglycosylase B-like protein; Signal peptide.
  
   
 0.477
CCK81657.1
GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family.
     
 0.472
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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