Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CCK81691.1Radical SAM domain protein. (489 aa)    
Predicted Functional Partners:
CCK81690.1
Glycosyl transferase, family II.
 
     0.825
CCK80752.1
Cobalamin-binding, radical SAM protein.
  
     0.775
CCK81681.1
Cobalamin-binding radical SAM protein.
  
     0.775
CCK81689.1
Predicted ubiquinone/menaquinone biosynthesis methyltransferase.
 
    0.648
CCK82013.1
Cobalamin-binding radical SAM protein.
  
     0.600
CCK81688.1
Radical SAM domain protein.
 
  
 0.492
CCK81012.1
Geranylgeranyl reductase.
 
  
 0.485
CCK80990.1
Geranylgeranyl reductase.
 
  
 0.421
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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