Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ccdACcdA: cytochrome c-type biogenesis protein; Signal anchor. (232 aa)    
Predicted Functional Partners:
msrAB
MsrAB: peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
  
 0.778
ccsA
CcsA: cytochrome c biogenesis protein; Signal peptide.
 
  
 0.737
ccmC
CcmC: cytochrome c assembly protein.
 
  
 0.728
ccsB
CcsB: cytochrome c biogenesis protein.
 
  
 0.671
CCK82104.1
Predicted thioredoxn; Signal peptide.
  
  
 0.583
trxB
TrxB: thioredoxin reductase.
 
  
 0.577
zupT
ZupT: zinc transporter; Signal peptide.
   
    0.569
rlgA
RlgA: resolvase.
  
    0.557
CCK82351.1
Cytochrome c assembly protein.
  
  
 0.548
CCK82352.1
Conserved uncharacterized protein.
  
  
 0.537
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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