Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK81802.1NADPH-dependent FMN reductase. (187 aa)    
Predicted Functional Partners:
fbaB
FbaB: fructose-bisphosphate aldolase, class I.
   
    0.597
lysM
LysM: peptidoglycan-binding protein; Signal peptide.
   
  
 0.583
osmY
OsmY: predicted osmotically-inducible protein Y; Signal peptide.
   
  
 0.563
cdhE
CdhE: CO dehydrogenase/acetyl-CoA synthase complex, gamma subunit.
  
    0.529
CCK80507.1
Putative serine protein kinase, related to PrkA.
   
    0.518
prkA
PrkA: serine protein kinase.
   
    0.518
katA
KatA: catalase; Belongs to the catalase family.
  
  
 0.515
cdhC
CdhC: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit.
  
     0.512
CCK81894.1
Transcriptional regulator, MerR family.
 
  
 0.482
tkt
Tkt: transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
  
 0.481
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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