Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCK81805.1Predicted polysaccharide export protein; Signal peptide. (345 aa)    
Predicted Functional Partners:
CCK81806.1
Lipopolysaccharide biosynthesis protein.
 
 
 0.960
CCK78943.1
Lipopolysaccharide biosynthesis protein.
 
 
 0.930
gumC1
Lipopolysaccharide biosynthesis protein.
 
 
 0.858
CCK81807.1
Putative capsular exopolysaccharide family protein.
 
 
 0.825
CCK81830.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.784
CCK78942.1
Putative polysaccharide export protein; Signal peptide.
  
  
  0.718
CCK80497.1
Exopolysaccharide synthesis protein, capsular exopolysaccharide family.
 
 
 0.710
epsB
EpsB: sugar transferase, PEPCTERM system associated.
 
  
 0.665
CCK78944.1
Putaitve capsular exopolysaccharide family protein.
 
 
 0.635
CCK79574.1
ABC transporter, ATP-binding protein, putative function in lipopolysaccharide export.
  
  
 0.616
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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