Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK81806.1Lipopolysaccharide biosynthesis protein. (478 aa)    
Predicted Functional Partners:
CCK81805.1
Predicted polysaccharide export protein; Signal peptide.
 
 
 0.960
CCK80495.1
Periplasmic polysaccharide export protein; Signal peptide.
 
 
 0.835
CCK78942.1
Putative polysaccharide export protein; Signal peptide.
 
 
 0.817
CCK81807.1
Putative capsular exopolysaccharide family protein.
 
  
 0.805
CCK81830.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.757
manC
ManC: mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.684
CCK80857.1
Transposase, IS4 family.
  
 
 0.662
CCK80895.1
Transposase, IS4 family.
  
 
 0.662
CCK80914.1
Transposase, IS4 family.
  
 
 0.662
CCK80935.1
Transposase, IS4 family.
  
 
 0.662
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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