Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rrf1Rrf1: response regulator of HMC operon. (117 aa)    
Predicted Functional Partners:
CCK81833.1
Two component system sensor histidine kinase.
 
 
 
 0.917
CCK81835.1
Universal stress protein family protein.
 
     0.796
hmcF
HmcF: HMC redox complex, cytoplasmic iron-sulfur protein.
 
    0.744
hmcA
HmcA: high-molecular-weight cytochrome c (cytochrome CC3).
 
  
 0.726
hmcE
HmcE: HMC redox complex, integral membrane protein; Signal peptide.
 
    0.690
CCK79955.1
Two component system response regulator.
 
 
   0.661
CCK79954.1
Two component system sensor histidine kinase.
 
 
 
 0.653
hmcC
HmcC: HMC redox complex, integral membrane protein.
 
     0.606
rrf2
Rrf2: HTH-type transcriptional regulator of HMC operon.
  
  
 0.567
CCK80555.1
Putative sensor protein.
 
   0.562
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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