Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hmcAHmcA: high-molecular-weight cytochrome c (cytochrome CC3). (535 aa)    
Predicted Functional Partners:
hmcC
HmcC: HMC redox complex, integral membrane protein.
 
   
 0.927
hmcE
HmcE: HMC redox complex, integral membrane protein; Signal peptide.
 
    0.902
hmcB
HmcB: HMC redox complex, transmembrane protein; Signal peptide.
 
     0.893
hmcF
HmcF: HMC redox complex, cytoplasmic iron-sulfur protein.
 
  
 0.867
CCK81835.1
Universal stress protein family protein.
 
 
 0.860
CCK81833.1
Two component system sensor histidine kinase.
 
 
 
 0.844
htpG
HtpG: chaperone protein; Molecular chaperone. Has ATPase activity.
  
 0.795
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 
 0.779
CCK80073.1
Universal stress protein family protein.
 
 
 0.777
CCK79954.1
Two component system sensor histidine kinase.
  
 
   0.765
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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