Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK81842.1Oxidotreductase FAD/NAD(P)-binding domain protein. (277 aa)    
Predicted Functional Partners:
gltD
GltD: glutamate synthase, small chain.
 
 
 0.996
rnfB
RnfB: predicted electron transport protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 0.979
CCK81124.1
Glutamate synthase beta chain-related oxidoreductase.
 
 0.976
CCK82240.1
Iron-sulfur-binding oxidoreductase, related to glutamate synthase small chain GltD.
 
 
 0.975
CCK78566.1
Predicted FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Related to bzdV of A. aromatoelum EbN1.
 
 
 0.974
pyrD
PyrD: dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.968
hdlA4
HdlA4: heterodisulfide reductase-like protein, iron-sulfur subunit.
 
 0.889
rnfB-2
FAD-dependent oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 0.796
pyrF
PyrF: orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
  
 0.760
pyrB
PyrB: aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
  
 0.759
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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