Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK81845.1Conserved uncharacterized protein. (141 aa)    
Predicted Functional Partners:
CCK81844.1
Conserved uncharacterized protein.
 
     0.912
tmk
Tmk: thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.600
CCK79168.1
4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
     0.479
CCK80280.1
Conserved uncharacterized protein.
  
     0.445
cdhD
CdhD: CO dehydrogenase/acetyl-CoA synthase complex, delta subunit.
 
     0.417
cdhC
CdhC: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit.
 
     0.406
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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