Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phaEPhaE: putative poly(3-hydroxyalkanoate) synthase component. (295 aa)    
Predicted Functional Partners:
phbC
PhbC: poly-beta-hydroxybutyrate polymerase.
 
  
 0.990
CCK81851.1
MaoC domain protein dehydratase.
 
  
  0.930
CCK81855.1
GAF domain protein.
 
     0.879
phaR
PhaR: predicted polyhydroxyalkanoate synthesis repressor; Signal peptide.
 
   
 0.789
CCK81544.1
Conserved uncharacterized protein; Signal peptide.
  
     0.669
CCK81545.1
Conserved uncharacterized protein; Signal peptide.
  
     0.662
CCK79147.1
Putative antibiotic biosynthesis monooxygenase.
  
     0.541
CCK81858.1
Uncharacterized protein.
     
 0.523
bamH1
BamH1: NADH-quinone oxidoreductase, subunit F.
     
 0.512
bamH3
BamH3: NADH-quinone oxidoreductase, subunit F.
     
 0.512
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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