Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK81858.1Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
CCK80642.1
Amylo-alpha-1,6-glucosidase.
  
 
 0.971
glgA
GlgA: glycogen synthase.
 
  
 0.822
glgP
GlgP: glycogen phosphorylase.
  
 
 0.663
glgP2
GlgP2: glycogen phosphorylase.
  
 
 0.663
CCK80469.1
Glycosyl transferase, family I.
  
 0.614
gapN
GapN: NADP-dependent glycerinaldehyde-3-phsophate dehydrogenase.
 
 
 0.595
CCK78911.1
Glycosyl transferase, group 1.
   
 0.527
CCK78982.1
Conserved uncharacterized protein, related to glycosyl transferase 1.
   
 0.527
CCK78983.1
Glycosyl transferase, group 1.
   
 0.527
CCK78985.1
Putative glycosyl transferase, group 1.
   
 0.527
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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