Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCK81866.1Conserved uncharacterized SH3 domain protein; Signal peptide. (205 aa)    
Predicted Functional Partners:
nadB
NadB: L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.823
cytC
CytC: cytochrome c, class III; Signal peptide.
  
     0.465
CCK81907.1
Zinc finger/thioredoxin domain protein.
  
     0.459
CCK78949.1
Plasmid stabilization system protein.
  
     0.417
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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