Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
iorB3IorB3: indolepyruvate oxidoreductase subunit B. (197 aa)    
Predicted Functional Partners:
iorA4
IorA4: indolepyruvate oxidoreductase subunit A; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.956
nifJ
NifJ: pyruvate-flavodoxin oxidoreductase.
  
 
 0.948
iorA2
IorA2: indolepyruvate oxidoreductase subunit A; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.863
iorA3
IorA3: indolepyruvate oxidoreductase subunit A; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.863
iorA
IorA: indolepyruvate oxidoreductase subunit A; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.859
mqnB
Predicted 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).
       0.773
aroQ
AroQ: 3-dehydroquinate dehydrogenase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.773
tatD
TatD: Mg-dependent deoxyribonuclease.
       0.768
CCK80000.1
ACT domain protein.
 
    0.637
padI2
PadI2: phenylglyoxylate:acceptor oxidoreductase, subunit I.
  
 
 0.622
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: medium (62%) [HD]