Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCK81925.1Conserved uncharacterized protein, DUF6; Signal peptide. (305 aa)    
Predicted Functional Partners:
CCK81924.1
Uncharacterized protein.
       0.773
kefC
KefC: predicted glutathione-regulated potassium-efflux system protein.
  
  
 0.690
CCK81963.1
Conserved uncharacterized membrane protein, DUF6.
  
     0.644
lysE
LysE: lysine exporter protein; Signal peptide.
  
  
 0.520
gltJ
GltJ: glutamate/aspartate transport system permease protein; Signal peptide.
 
    0.456
CCK79824.1
Diguanylate cyclase (GGDEF) domain protein; Signal peptide.
  
  
 0.454
secY
SecY: preprotein translocase, subunit Y; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
   
 
 0.434
CCK81927.1
Predicted membrane protein.
       0.427
CCK81926.1
Conserved uncharacterized protein; Signal peptide.
       0.417
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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