STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK81948.1Transcriptional regulator, TetR family. (226 aa)    
Predicted Functional Partners:
CCK78385.1
Transcriptional regulator, TetR family.
  
     0.590
CCK80630.1
Conserved uncharacterized protein; Signal peptide.
  
     0.573
CCK80857.1
Transposase, IS4 family.
  
   
 0.547
CCK80895.1
Transposase, IS4 family.
  
   
 0.547
CCK80914.1
Transposase, IS4 family.
  
   
 0.547
CCK80935.1
Transposase, IS4 family.
  
   
 0.547
CCK82243.1
Conserved uncharacterized protein; Signal peptide.
 
    0.534
CCK81459.1
Conserved uncharacterized protein; Signal peptide.
  
     0.525
CCK81789.1
Predicted polyketide synthase.
     
 0.524
CCK79335.1
Conserved uncharacterized protein; Signal peptide.
  
     0.518
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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