Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCK81955.1Predicted ABC transporter, periplasmic binding protein; Signal peptide. (303 aa)    
Predicted Functional Partners:
gltJ
GltJ: glutamate/aspartate transport system permease protein; Signal peptide.
 
 
 0.681
CCK79199.1
Predicted extracellular solute-binding protein, family 3, related to GltI.
  
     0.612
CCK81956.1
Two component system sensor histidine kinase.
       0.551
CCK82093.1
Conserved uncharacterized protein; Signal peptide.
  
     0.525
pilZ
PilZ: predicted type IV pilus assembly protein.
  
     0.474
CCK81954.1
Universal stress protein family protein.
  
 
 0.444
CCK79334.1
Conserved uncharacterized protein.
  
   
 0.427
CCK79336.1
Helicase domain protein.
  
     0.410
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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