Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cooSCooS: carbon monoxide dehydrogenase. (631 aa)    
Predicted Functional Partners:
cdhC
CdhC: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit.
 
 
 0.995
cdhD
CdhD: CO dehydrogenase/acetyl-CoA synthase complex, delta subunit.
 
 0.985
cdhE
CdhE: CO dehydrogenase/acetyl-CoA synthase complex, gamma subunit.
 
 
 0.983
cooF
CooF: iron-sulfur protein of carbon monoxide dehydrogenase.
    
 0.976
fwdE
FwdE: formylmethanofuran dehydrogenase, subunit E.
  
  
  0.954
fwdE2
FwdE2: formlmethanofuran dehydrogenase, subunit E.
  
  
  0.938
CCK78597.1
Putative 4Fe-4S ferredoxin.
    
 0.908
cdh1
Cdh1: carbon-monoxide dehydrogenase 1.
  
  
 
0.907
dsrA
DsrA: sulfite reductase, dissimilatory-type, subunit alpha.
     
 0.905
cdhA
CdhA: CO dehydrogenase, catalytic subunit.
  
  
 
0.905
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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