STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK81978.1enoyl-CoA hydratase/isomerase related to dienoyl-CoA hydratase. (256 aa)    
Predicted Functional Partners:
hbd
Hbd: 3-hydroxybutyryl-CoA dehyrogenase.
 
 0.964
CCK81789.1
Predicted polyketide synthase.
  
 
 0.929
had
Had: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase.
  
 
 0.919
bamC1
BamC1: 4Fe-4S ferredoxin.
     
  0.900
bamB1
BamB1: aldehyde:ferredoxin oxidoreductase.
     
  0.900
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 0.799
CCK79625.1
Two component system sensor histidine kinase, hybrid.
  
 
 0.770
CCK81557.1
Two component system sensor histidine kinase, hybrid.
   
 
 0.770
CCK79628.1
Two component system sensor histidine kinase, hybrid, associated with CheB and CheR.
   
 
 0.768
CCK78441.1
Response regulator protein.
   
 
 0.767
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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