Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
CCK82061.1Conserved uncharacterized protein, UPF0066. (179 aa)    
Predicted Functional Partners:
CCK78222.1
Putative methyltransferase.
 
   
 0.609
CCK82057.1
Predicted oligopeptide/dipeptide ABC transporter, perilasmic binding protein.
       0.462
CCK82058.1
Predicted oligopeptide/dipeptide ABC transporter, permease protein; Signal peptide.
       0.462
CCK82059.1
Predicted oligopeptide/dipeptide ABC transporter, permease protein; Signal anchor.
       0.462
CCK82060.1
Predicted oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
       0.462
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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