Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK82072.1ABC transporter, ATP-binding protein. (233 aa)    
Predicted Functional Partners:
CCK82073.1
ABC transporter, permease protein; Signal peptide.
 
     0.956
CCK79209.1
Cation ABC transporter, permease protein.
  
 
 0.944
CCK82074.1
NMT1/THI5 like domain protein; Signal peptide.
 
  
 0.939
CCK79211.1
Periplasmic solute-binding protein; Signal peptide; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.784
cbiO
CbiO: putative cobalt import ABC-binding protein.
  
   
 0.744
CCK82486.1
ABC transporter, ATP-binding protein.
  
     0.639
CCK78217.1
ABC-type transport system, ATP-binding protein.
 
  
 0.636
fur
Fur: ferric uptake regulator.
  
  
 0.634
wtpC
wtpC: molybdate/tungstade transport system, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
     0.613
CCK80295.1
Predicted ABC transporter, ATP-binding protein; Signal peptide.
 
    0.597
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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