STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK82073.1ABC transporter, permease protein; Signal peptide. (255 aa)    
Predicted Functional Partners:
CCK82074.1
NMT1/THI5 like domain protein; Signal peptide.
 
  
 0.976
CCK82072.1
ABC transporter, ATP-binding protein.
 
     0.957
CCK82184.1
ABC transporter, ATP-binding protein.
 
  
 0.695
CCK82111.1
Putative ABC transporter related protein.
 
  
 0.688
ssuB
SsuB: aliphatic sulfonates import system, ATP-binding protein.
 
  
 0.686
hysB
HysB: periplasmic [NiFeSe] hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
       0.550
CCK82071.1
Pyridoxamine 5?-phosphate oxidase-related protein, FMN-binding.
 
     0.527
CCK82114.1
NMT1/THI5 like domain protein; Signal peptide.
  
  
 0.525
CCK80512.1
Putative ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic binding protein.
  
  
 0.479
CCK81335.1
Predicted ABC transporter, periplasmic binding protein.
  
  
 0.479
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.