Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK82183.1ABC transporter, permease protein; Signal anchor. (301 aa)    
Predicted Functional Partners:
CCK82182.1
ABC transporter, periplasmic protein; Signal peptide.
 
 0.998
CCK82184.1
ABC transporter, ATP-binding protein.
 0.998
CCK82111.1
Putative ABC transporter related protein.
 
 0.948
ssuB
SsuB: aliphatic sulfonates import system, ATP-binding protein.
 
 0.944
CCK81498.1
Putative ABC transporter, periplasmic protein, TAT signal.
 
 
 0.917
CCK80512.1
Putative ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic binding protein.
 
 
 0.897
CCK81496.1
Putative ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic binding protein.
 
 
 0.897
CCK81335.1
Predicted ABC transporter, periplasmic binding protein.
 
 
 0.894
CCK82114.1
NMT1/THI5 like domain protein; Signal peptide.
 
 
 0.759
CCK82181.1
Predicted 2-hydroxyglutaryl-CoA dehydratase, D component.
 
     0.737
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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