Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK82194.1Predicted antitermination regulatory protein, ANTAR and GAF domain. (252 aa)    
Predicted Functional Partners:
CCK78497.1
Putative GAF sensor protein.
  
     0.708
CCK79749.1
Putative GAF sensor protein.
 
     0.666
CCK82195.1
Transcriptional regulator, LuxR family.
  
 
 0.607
CCK81855.1
GAF domain protein.
 
     0.473
ptsH
PtsH: phosphocarrier protein HPr.
    
 
 0.436
CCK80514.1
Conserved uncharacterized protein.
    
 
 0.436
CCK80058.1
Two component system sensor histidine kinase.
   
 
 0.421
CCK79548.1
Putative general secrestion pathway protein L.
  
     0.408
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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