Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK82201.1Conserved uncharacterized protein. (360 aa)    
Predicted Functional Partners:
CCK80492.1
Polysaccharide deacetylase.
 
   
 0.804
epsHI
EpsHI: exosortase I fusion protein.
 
     0.791
gumC1
Lipopolysaccharide biosynthesis protein.
 
     0.784
CCK81679.1
Conserved uncharacterized protein.
  
     0.775
epsB
EpsB: sugar transferase, PEPCTERM system associated.
 
     0.716
CCK80469.1
Glycosyl transferase, family I.
 
     0.709
CCK80460.1
UBA/THIF-type NAD/FAD binding family protein.
 
     0.690
CCK81803.1
Predicted general secretion pathway protein.
 
     0.690
CCK80399.1
Outer membrane protein, related to OmpA/MotB.
 
     0.689
CCK80462.1
Putative long-chain N-acyl amino acid synthase.
  
     0.675
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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