Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pspCPspC: phage shock protein C. (146 aa)    
Predicted Functional Partners:
pspA
PspA: phage shock protein A.
 
 
 0.993
CCK79110.1
Suppressor of sigma54-dependent transcription.
  
 
 0.916
CCK78441.1
Response regulator protein.
  
 
 0.850
CCK78832.1
Two component system sensor kinase, hybrid.
   
 
 0.840
CCK80287.1
Conserved uncharacterized membrane protein, DUF360; Signal anchor.
  
  
 0.839
CCK79042.1
Two component system sensor histidine kinase, barA-like.
   
 
 0.837
CCK79830.1
Two component system sensor histidine kinase, hybrid.
   
 
 0.835
CCK81418.1
Two component system sensor histidine kinase, hybrid; Signal peptide.
  
 
 0.819
pspB
PspB: predicted phage shock protein B; Signal anchor.
       0.817
CCK81557.1
Two component system sensor histidine kinase, hybrid.
  
 
 0.807
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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