Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK82214.1Alpha/beta hydrolase fold protein. (270 aa)    
Predicted Functional Partners:
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 0.848
CCK81789.1
Predicted polyketide synthase.
  
 
 0.708
CCK81829.1
Amino acid adenylation domain protein.
  
 
 0.646
CCK79701.1
Alpha/beta hydrolase fold protein.
  
     0.554
CCK82469.1
O-methyltransferase, family II.
  
  
 0.497
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.
  
 
 
 0.482
CCK81989.1
Conserved uncharacterized protein, rossmann fold.
 
  
 0.457
CCK81012.1
Geranylgeranyl reductase.
  
  
 0.427
birA2
BirA2: biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.426
CCK79135.1
MmgE/PrpD family protein.
  
   
 0.418
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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