Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK82229.1Conserved uncharacterized protein. (230 aa)    
Predicted Functional Partners:
CCK79463.1
Predicted translation elongation factor P.
  
 0.796
efp
Efp: elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.796
dsrB
DsrB: sulfite reductase, dissimilatory-type, beta subunit.
 
     0.766
dsrD
DsrD: sulfite reductase, dissimilatory-type, delta subunit; Possibly involved in transcription or translation of sulfite reductase genes.
  
     0.761
dsrA
DsrA: sulfite reductase, dissimilatory-type, subunit alpha.
 
     0.754
CCK81568.1
Conserved uncharacterized protein.
  
     0.744
CCK79807.1
Conserved uncharacterized protein.
  
     0.728
dsrJ
DsrJ: predicted redox complex linked to DsrAB, cytochrome c subunit; Signal peptide.
  
     0.728
dsrM
DsrM: predicted redox complex linked to DsrAB, transmembrane subunit; Signal peptide.
  
     0.700
qmoB
QmoB: predicted quinone interacting membrane bound oxidoreductase, subunit B.
 
     0.682
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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